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Ggplot fix#158

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HDash merged 6 commits into
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ggplot-fix
Sep 23, 2025
Merged

Ggplot fix#158
HDash merged 6 commits into
masterfrom
ggplot-fix

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@HDash

@HDash HDash commented Sep 23, 2025

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Fix deprecated functions and arguments from ggplot 4.0.0 release

Check NEWS for more details

Fixes #157

@HDash HDash self-assigned this Sep 23, 2025
@HDash HDash added the bug Something isn't working label Sep 23, 2025
Current available version of ComplexUpset (1.3.6) is not compatible with ggplot v4.5.0

Check the following links for more details:
- krassowski/complex-upset#212
- krassowski/complex-upset#213
@HDash

HDash commented Sep 23, 2025

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The current version of ComplexUpset package (v1.3.6) does not support ggplot >= v4.0.0.

This package is required to enable the functionality of upset_plot in EpiCompare. To prevent deprecation, a check was added to disable this feature if an incompatible version of ComplexUpset was found when ggplot >= v4.0.0 was installed.

Feature should work fine if a newer version of ComplexUpset is released with this issue fixed. For more details, refer to:

@codecov

codecov Bot commented Sep 23, 2025

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Welcome to Codecov 🎉

Once you merge this PR into your default branch, you're all set! Codecov will compare coverage reports and display results in all future pull requests.

Thanks for integrating Codecov - We've got you covered ☂️

@HDash HDash merged commit 242aa67 into master Sep 23, 2025
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